Error climatology file: not include initialization time

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aniskiewicz.paulina

Error climatology file: not include initialization time

#1 Unread post by aniskiewicz.paulina »

Hi :)

I have a following problem when I run my application

Code: Select all

CHECK_MULTIFILE - Error while processing Climatology multi-files:
                   data does not include initialization time = 2014-04-01 00:59:04.00

   2014-04-01 00:59:04.00  1948-01-01 00:00:00.00     /users/work/paulina1/ROMS/ROMS/ROMS_Porsanger_test_1/norfjords_160m_clima.nc

 CHECK_MULTIFILE - Error while checking input Climatology file:
                   /users/work/paulina1/ROMS/ROMS/ROMS_Porsanger_test_1/norfjords_160m_clima.nc
                   last data time record available is for day: 1948-01-01 00:00:00.00
                   but data is needed to finish run until day: 2014-04-01 06:32:24.00

 Elapsed CPU time (seconds):

 Thread #  0 CPU:     160.673
 Total:               160.673

 Nonlinear model elapsed CPU time profile, Grid: 01

  Allocation and array initialization ..............	   132.447  (82.4328 %)
  2D/3D coupling, vertical metrics .................         5.387  ( 3.3529 %)
  Omega vertical velocity ..........................         2.308  ( 1.4362 %)
  Equation of state for seawater ...................         3.763  ( 2.3423 %)
                                              Total:	   143.905   89.5642

  Unique code regions profiled .....................	   143.905   89.5642 %
  Residual, non-profiled code ......................        16.767   10.4358 %


 All percentages are with respect to total time =          160.673


 ROMS/TOMS - Output NetCDF summary for Grid 01:

 Analytical header files used:

     ROMS/Functionals/ana_grid.h
     ROMS/Functionals/ana_initial.h
     ROMS/Functionals/ana_nudgcoef.h

 ROMS/TOMS - I/O error ............... exit_flag:   4


 ERROR: I/O related problem.
My input climatology file looks like this:

Code: Select all

 	
dimensions:
	xi_rho = 901 ;
	eta_rho = 451 ;
	xi_u = 900 ;
	eta_u = 451 ;
	xi_v = 901 ;
	eta_v = 450 ;
	s_rho = 35 ;
	clim_time = UNLIMITED ; // (2184 currently)
variables:
	float u(clim_time, s_rho, eta_u, xi_u) ;
		u:long_name = "u-momentum component" ;
		u:units = "meter second-1" ;
		u:time = "clim_time" ;
		u:field = "u-velocity, scalar, series" ;
	float v(clim_time, s_rho, eta_v, xi_v) ;
		v:long_name = "v-momentum component" ;
		v:units = "meter second-1" ;
		v:time = "clim_time" ;
		v:field = "v-velocity, scalar, series" ;
	float salt(clim_time, s_rho, eta_rho, xi_rho) ;
		salt:long_name = "salinity" ;
		salt:units = "PSU" ;
		salt:time = "clim_time" ;
		salt:field = "salinity, scalar, series" ;
	float temp(clim_time, s_rho, eta_rho, xi_rho) ;
		temp:long_name = "potential temperature" ;
		temp:units = "Celsius" ;
		temp:time = "clim_time" ;
		temp:field = "temperature, scalar, series" ;
	float zeta(clim_time, eta_rho, xi_rho) ;
		zeta:long_name = "sea level" ;
		zeta:units = "meter" ;
		zeta:time = "clim_time" ;
		zeta:field = "sea level, scalar, series" ;
	float ubar(clim_time, eta_u, xi_u) ;
		ubar:long_name = "u-2D momentum component" ;
		ubar:units = "meter second-1" ;
		ubar:time = "clim_time" ;
		ubar:field = "u-2D velocity, scalar, series" ;
	float vbar(clim_time, eta_v, xi_v) ;
		vbar:long_name = "v-2D momentum component" ;
		vbar:units = "meter second-1" ;
		vbar:time = "clim_time" ;
		vbar:field = "v-2D velocity, scalar, series" ;
	float aice(clim_time, eta_rho, xi_rho) ;
		aice:long_name = "sea ice concentration" ;
		aice:units = "" ;
		aice:time = "clim_time" ;
		aice:field = "aice, scalar, series" ;
	float hice(clim_time, eta_rho, xi_rho) ;
		hice:long_name = "sea ice thickness" ;
		hice:units = "meter" ;
		hice:time = "clim_time" ;
		hice:field = "hice, scalar, series" ;
	float hsno(clim_time, eta_rho, xi_rho) ;
		hsno:long_name = "snow thickness" ;
		hsno:units = "meter" ;
		hsno:time = "clim_time" ;
		hsno:field = "hsno, scalar, series" ;
	float uice(clim_time, eta_u, xi_u) ;
		uice:long_name = "u-sea ice velocity" ;
		uice:units = "meter second-1" ;
		uice:time = "clim_time" ;
		uice:field = "uice, scalar, series" ;
        float vice(clim_time, eta_v, xi_v) ;
		vice:long_name = "v-sea ice velocity" ;
		vice:units = "meter second-1" ;
		vice:time = "clim_time" ;
		vice:field = "vice, scalar, series" ;
	float tice(clim_time, eta_rho, xi_rho) ;
		tice:long_name = "internal sea ice temperature" ;
		tice:units = "Celsius" ;
		tice:time = "clim_time" ;
		tice:field = "tice, scalar, series" ;
	float sfwat(clim_time, eta_rho, xi_rho) ;
		sfwat:long_name = "surface melt pond thickness" ;
		sfwat:units = "meter" ;
		sfwat:time = "clim_time" ;
		sfwat:field = "sfwat, scalar, series" ;
	float ageice(clim_time, eta_rho, xi_rho) ;
		ageice:long_name = "age of sea ice" ;
		ageice:units = "days" ;
		ageice:time = "clim_time" ;
		ageice:field = "ageice, scalar, series" ;
	float sig11(clim_time, eta_rho, xi_rho) ;
		sig11:long_name = "internal ice stress component 11" ;
		sig11:units = "N meter-1" ;
		sig11:time = "clim_time" ;
		sig11:field = "sig11, scalar, series" ;
	float sig22(clim_time, eta_rho, xi_rho) ;
		sig22:long_name = "internal ice stress component 22" ;
		sig22:units = "N meter-1" ;
		sig22:time = "clim_time" ;
		sig22:field = "sig22, scalar, series" ;
	float sig12(clim_time, eta_rho, xi_rho) ;
		sig12:long_name = "internal ice stress component 12" ;
		sig12:units = "N meter-1" ;
		sig12:time = "clim_time" ;
		sig12:field = "sig12, scalar, series" ;
	double clim_time(clim_time) ;
		clim_time:long_name = "days since 1948-01-01 00:00:00" ;
		clim_time:units = "days" ;
		clim_time:field = "time, scalar, series" ;
Could you tell me what should I change to run ROMS with this time format?
My initialization time in *in file looks like this:

Code: Select all

      DSTART = 24197.0410156d0                      ! days
  TIDE_START = 24197.041056d0                       ! days
    TIME_REF = 19480101.00                      ! yyyymmdd.dd
I know ROMS may work with this type of data format, but something is unfortunately wrong.
It would be nice if you could help me.

Best regards
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User avatar
kate
Posts: 4091
Joined: Wed Jul 02, 2003 5:29 pm
Location: CFOS/UAF, USA

Re: Error climatology file: not include initialization time

#2 Unread post by kate »

What are the values of clim_time?
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aniskiewicz.paulina

Re: Error climatology file: not include initialization time

#3 Unread post by aniskiewicz.paulina »

Thank you for your response :)


Here are the values:

Code: Select all

clim_time = 24197.041015625, 24197.08203125, 24197.125, 24197.16796875,
    24197.208984375, 24197.25, 24197.291015625, 24197.333984375, 24197.375,
    24197.416015625, 24197.45703125, 24197.5, 24197.54296875,
    24197.583984375, 24197.625, 24197.666015625, 24197.708984375, 24197.75,
    24197.791015625, 24197.833984375, 24197.875, 24197.916015625,
    24197.958984375, 24198, 24198.041015625, 24198.08203125, 24198.125,
    24198.166015625, 24198.208984375, 24198.25, 24198.291015625,
    24198.333984375, 24198.375, 24198.416015625, 24198.45703125, 24198.5,
    24198.54296875, 24198.583984375, 24198.625, 24198.666015625,
    24198.708984375, 24198.75, 24198.791015625, 24198.83203125, 24198.875,
    24198.916015625, 24198.958984375, 24199, 24199.041015625, 24199.08203125,
    24199.125, 24199.16796875, 24199.208984375, 24199.25, 24199.291015625,
    24199.333984375, 24199.375, 24199.416015625, 24199.45703125, 24199.5,
    24199.54296875, 24199.583984375, 24199.625, 24199.666015625,
    24199.708984375, 24199.75, 24199.791015625, 24199.833984375, 24199.875,
    24199.916015625, 24199.958984375, 24200, 24200.041015625, 24200.08203125,
    24200.125, 24200.166015625, 24200.208984375, 24200.25, 24200.291015625,
    24200.333984375, 24200.375, 24200.416015625, 24200.45703125, 24200.5,
    24200.54296875, 24200.583984375, 24200.625, 24200.666015625,
    24200.708984375, 24200.75, 24200.791015625, 24200.83203125, 24200.875,
    24200.916015625, 24200.958984375, 24201, 24201.041015625, 24201.08203125,
    24201.125, 24201.16796875, 24201.208984375, 24201.25, 24201.291015625,
    24201.333984375, 24201.375, 24201.416015625, 24201.45703125, 24201.5,
    24201.54296875, 24201.583984375, 24201.625, 24201.666015625,
    24201.708984375, 24201.75, 24201.791015625, 24201.833984375, 24201.875,
    24201.916015625, 24201.958984375, 24202, 24202.041015625, 24202.08203125,
    24202.125, 24202.166015625, 24202.208984375, 24202.25, 24202.291015625,
    24202.333984375, 24202.375, 24202.416015625, 24202.45703125, 24202.5,
    24202.54296875, 24202.583984375, 24202.625, 24202.666015625,
    24202.708984375, 24202.75, 24202.791015625, 24202.83203125, 24202.875,
    24202.916015625, 24202.958984375, 24203, 24203.041015625, 24203.08203125,
    24203.125, 24203.16796875, 24203.208984375, 24203.25, 24203.291015625,
    24203.333984375, 24203.375, 24203.416015625, 24203.45703125, 24203.5,
    24203.54296875, 24203.583984375, 24203.625, 24203.666015625,
    24203.708984375, 24203.75, 24203.791015625, 24203.833984375, 24203.875,
    24203.916015625, 24203.958984375, 24204, 24204.041015625, 24204.08203125,
    24204.125, 24204.166015625, 24204.208984375, 24204.25, 24204.291015625,
    24204.333984375, 24204.375, 24204.416015625, 24204.45703125, 24204.5,
    24204.54296875, 24204.583984375, 24204.625, 24204.666015625,
    24204.708984375, 24204.75, 24204.791015625, 24204.83203125, 24204.875,
    24204.916015625, 24204.958984375, 24205, 24205.041015625, 24205.08203125,
    24205.125, 24205.16796875, 24205.208984375, 24205.25, 24205.291015625,
    24205.333984375, 24205.375, 24205.416015625, 24205.45703125, 24205.5,
    24205.54296875, 24205.583984375, 24205.625, 24205.666015625,
    24205.708984375, 24205.75, 24205.791015625, 24205.833984375, 24205.875,
    24205.916015625, 24205.958984375, 24206, 24206.041015625, 24206.08203125,
    24206.125, 24206.166015625, 24206.208984375, 24206.25, 24206.291015625,
    24206.333984375, 24206.375, 24206.416015625, 24206.45703125, 24206.5,
    24206.54296875, 24206.583984375, 24206.625, 24206.666015625,
    24206.708984375, 24206.75, 24206.791015625, 24206.83203125, 24206.875,
    24206.916015625, 24206.958984375, 24207, 24207.041015625, 24207.08203125,
    24207.125, 24207.16796875, 24207.208984375, 24207.25, 24207.291015625,
    24207.333984375, 24207.375, 24207.416015625, 24207.45703125, 24207.5,
    24207.54296875, 24207.583984375, 24207.625, 24207.666015625,
    24207.708984375, 24207.75, 24207.791015625, 24207.833984375, 24207.875,
    24207.916015625, 24207.958984375, 24208, 24208.041015625, 24208.08203125,
    24208.125, 24208.166015625, 24208.208984375, 24208.25, 24208.291015625,
    24208.333984375, 24208.375, 24208.416015625, 24208.45703125, 24208.5,
    24208.54296875, 24208.583984375, 24208.625, 24208.666015625,
    24208.708984375, 24208.75, 24208.791015625, 24208.83203125, 24208.875,
    24208.916015625, 24208.958984375, 24209, 24209.041015625, 24209.08203125,
    24209.125, 24209.16796875, 24209.208984375, 24209.25, 24209.291015625,
    24209.333984375, 24209.375, 24209.416015625, 24209.45703125, 24209.5,
    24209.54296875, 24209.583984375, 24209.625, 24209.666015625,
    24209.708984375, 24209.75, 24209.791015625, 24209.833984375, 24209.875,
    24209.916015625, 24209.958984375, 24210, 24210.041015625, 24210.08203125,
    24210.125, 24210.166015625, 24210.208984375, 24210.25, 24210.291015625,
    24210.333984375, 24210.375, 24210.416015625, 24210.45703125, 24210.5,
    24210.54296875, 24210.583984375, 24210.625, 24210.666015625,
    24210.708984375, 24210.75, 24210.791015625, 24210.83203125, 24210.875,
    24210.916015625, 24210.958984375, 24211, 24211.041015625, 24211.08203125,
    24211.125, 24211.16796875, 24211.208984375, 24211.25, 24211.291015625,
    24211.333984375, 24211.375, 24211.416015625, 24211.45703125, 24211.5,
    24211.54296875, 24211.583984375, 24211.625, 24211.666015625,
    24211.708984375, 24211.75, 24211.791015625, 24211.833984375, 24211.875,
    24211.916015625, 24211.958984375, 24212, 24212.041015625, 24212.08203125,
    24212.125, 24212.166015625, 24212.208984375, 24212.25, 24212.291015625,
    24212.333984375, 24212.375, 24212.416015625, 24212.45703125, 24212.5,
    24212.54296875, 24212.583984375, 24212.625, 24212.666015625,
    24212.708984375, 24212.75, 24212.791015625, 24212.83203125, 24212.875,
    24212.916015625, 24212.958984375, 24213, 24213.041015625, 24213.08203125,
    24213.125, 24213.16796875, 24213.208984375, 24213.25, 24213.291015625,
    24213.333984375, 24213.375, 24213.416015625, 24213.45703125, 24213.5,
    24213.54296875, 24213.583984375, 24213.625, 24213.666015625,
    24213.708984375, 24213.75, 24213.791015625, 24213.833984375, 24213.875,
    24213.916015625, 24213.958984375, 24214, 24214.041015625, 24214.08203125,
    24214.125, 24214.166015625, 24214.208984375, 24214.25, 24214.291015625,
    24214.333984375, 24214.375, 24214.416015625, 24214.45703125, 24214.5,
    24214.54296875, 24214.583984375, 24214.625, 24214.666015625,
    24214.708984375, 24214.75, 24214.791015625, 24214.83203125, 24214.875,
    24214.916015625, 24214.958984375, 24215, 24215.041015625, 24215.08203125,
    24215.125, 24215.16796875, 24215.208984375, 24215.25, 24215.291015625,
    24215.333984375, 24215.375, 24215.416015625, 24215.45703125, 24215.5,
    24215.54296875, 24215.583984375, 24215.625, 24215.666015625,
    24215.708984375, 24215.75, 24215.791015625, 24215.833984375, 24215.875,
    24215.916015625, 24215.958984375, 24216, 24216.041015625, 24216.08203125,
    24216.125, 24216.166015625, 24216.208984375, 24216.25, 24216.291015625,
    24216.333984375, 24216.375, 24216.416015625, 24216.45703125, 24216.5,
    24216.54296875, 24216.583984375, 24216.625, 24216.666015625,
    24216.708984375, 24216.75, 24216.791015625, 24216.83203125, 24216.875,
    24216.916015625, 24216.958984375, 24217, 24217.041015625, 24217.08203125,
    24217.125, 24217.16796875, 24217.208984375, 24217.25, 24217.291015625,
    24217.333984375, 24217.375, 24217.416015625, 24217.45703125, 24217.5,
    24217.54296875, 24217.583984375, 24217.625, 24217.666015625,
    24217.708984375, 24217.75, 24217.791015625, 24217.833984375, 24217.875,
    24217.916015625, 24217.958984375, 24218, 24218.041015625, 24218.08203125,
    24218.125, 24218.166015625, 24218.208984375, 24218.25, 24218.291015625,
    24218.333984375, 24218.375, 24218.416015625, 24218.45703125, 24218.5,
    24218.54296875, 24218.583984375, 24218.625, 24218.666015625,
    24218.708984375, 24218.75, 24218.791015625, 24218.83203125, 24218.875,
    24218.916015625, 24218.958984375, 24219, 24219.041015625, 24219.08203125,
    24219.125, 24219.16796875, 24219.208984375, 24219.25, 24219.291015625,
    24219.333984375, 24219.375, 24219.416015625, 24219.45703125, 24219.5,
    24219.54296875, 24219.583984375, 24219.625, 24219.666015625,
    24219.708984375, 24219.75, 24219.791015625, 24219.833984375, 24219.875,
    24219.916015625, 24219.958984375, 24220, 24220.041015625, 24220.08203125,
    24220.125, 24220.166015625, 24220.208984375, 24220.25, 24220.291015625,
    24220.333984375, 24220.375, 24220.416015625, 24220.45703125, 24220.5,
    24220.54296875, 24220.583984375, 24220.625, 24220.666015625,
    24220.708984375, 24220.75, 24220.791015625, 24220.83203125, 24220.875,
    24220.916015625, 24220.958984375, 24221, 24221.041015625, 24221.08203125,
    24221.125, 24221.16796875, 24221.208984375, 24221.25, 24221.291015625,
    24221.333984375, 24221.375, 24221.416015625, 24221.45703125, 24221.5,
    24221.54296875, 24221.583984375, 24221.625, 24221.666015625,
    24221.708984375, 24221.75, 24221.791015625, 24221.833984375, 24221.875,
    24221.916015625, 24221.958984375, 24222, 24222.041015625, 24222.08203125,
    24222.125, 24222.166015625, 24222.208984375, 24222.25, 24222.291015625,
    24222.333984375, 24222.375, 24222.416015625, 24222.45703125, 24222.5,
    24222.54296875, 24222.583984375, 24222.625, 24222.666015625,
    24222.708984375, 24222.75, 24222.791015625, 24222.83203125, 24222.875,
    24222.916015625, 24222.958984375, 24223, 24223.041015625, 24223.08203125,
    24223.125, 24223.16796875, 24223.208984375, 24223.25, 24223.291015625,
    24223.333984375, 24223.375, 24223.416015625, 24223.45703125, 24223.5,
    24223.54296875, 24223.583984375, 24223.625, 24223.666015625,
    24223.708984375, 24223.75, 24223.791015625, 24223.833984375, 24223.875,
    24223.916015625, 24223.958984375, 24224, 24224.041015625, 24224.08203125,
    24224.125, 24224.166015625, 24224.208984375, 24224.25, 24224.291015625,
    24224.333984375, 24224.375, 24224.416015625, 24224.45703125, 24224.5,
    24224.54296875, 24224.583984375, 24224.625, 24224.666015625,
    24224.708984375, 24224.75, 24224.791015625, 24224.83203125, 24224.875,
    24224.916015625, 24224.958984375, 24225, 24225.041015625, 24225.08203125,
    24225.125, 24225.16796875, 24225.208984375, 24225.25, 24225.291015625,
    24225.333984375, 24225.375, 24225.416015625, 24225.45703125, 24225.5,
    24225.54296875, 24225.583984375, 24225.625, 24225.666015625,
    24225.708984375, 24225.75, 24225.791015625, 24225.833984375, 24225.875,
    24225.916015625, 24225.958984375, 24226, 24226.041015625, 24226.08203125,
    24226.125, 24226.166015625, 24226.208984375, 24226.25, 24226.291015625,
    24226.333984375, 24226.375, 24226.416015625, 24226.45703125, 24226.5,
    24226.54296875, 24226.583984375, 24226.625, 24226.666015625,
    24226.708984375, 24226.75, 24226.791015625, 24226.83203125, 24226.875,
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    24272.54296875, 24272.583984375, 24272.625, 24272.666015625,
    24272.708984375, 24272.75, 24272.791015625, 24272.83203125, 24272.875,
    24272.916015625, 24272.958984375, 24273, 24273.041015625, 24273.08203125,
    24273.125, 24273.16796875, 24273.208984375, 24273.25, 24273.291015625,
    24273.333984375, 24273.375, 24273.416015625, 24273.45703125, 24273.5,
    24273.54296875, 24273.583984375, 24273.625
I've tried to run the simulation once again using this start time:

Code: Select all


      DSTART = 24197.041015625d0                      ! days
      TIDE_START = 24197.041015625d0                       ! days
      TIME_REF = 19480101.00
But I still have an error (but little bit different than in previous simulation):

Code: Select all

CHECK_MULTIFILE - Error while checking input Climatology file:
                   /users/work/paulina1/ROMS/ROMS/ROMS_Porsanger_test_1/norfjords_160m_clima.nc
                   last data time record available is for day: 1948-01-01 00:00:00.00
                   but data is needed to finish run until day: 2014-04-01 06:32:24.00

 Elapsed CPU time (seconds):

 Thread #  0 CPU:     159.293
 Total:               159.293

 Nonlinear model elapsed CPU time profile, Grid: 01

  Allocation and array initialization ..............       132.498  (83.1788 %)
  2D/3D coupling, vertical metrics .................         5.053  ( 3.1723 %)
  Omega vertical velocity ..........................         1.838  ( 1.1537 %)
  Equation of state for seawater ...................         3.135  ( 1.9678 %)
                                              Total:       142.523   89.4726

  Unique code regions profiled .....................       142.523   89.4726 %
  Residual, non-profiled code ......................        16.769   10.5274 %
  Unique code regions profiled .....................       142.523   89.4726 %
  Residual, non-profiled code ......................        16.769   10.5274 %


 All percentages are with respect to total time =          159.293


 ROMS/TOMS - Output NetCDF summary for Grid 01:

 Analytical header files used:

     ROMS/Functionals/ana_grid.h
     ROMS/Functionals/ana_initial.h
     ROMS/Functionals/ana_nudgcoef.h

 ROMS/TOMS - I/O error ............... exit_flag:   4


 ERROR: I/O related problem.
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User avatar
kate
Posts: 4091
Joined: Wed Jul 02, 2003 5:29 pm
Location: CFOS/UAF, USA

Re: Error climatology file: not include initialization time

#4 Unread post by kate »

It looks like it is somehow finding a record with a time of zero at the end. I don't know why.
DSTART = 24197.0410156d0 ! days
TIDE_START = 24197.041056d0 ! days
TIME_REF = 19480101.00 ! yyyymmdd.dd
If you have tides, TIDE_START should be an offset relative to DSTART. I think it should be zero here.
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aniskiewicz.paulina

Re: Error climatology file: not include initialization time

#5 Unread post by aniskiewicz.paulina »

Dear Kate

I solved my problem. Last values in clim_time had 0 times:

Code: Select all

 clim_time = 24197.041015625, 24197.08203125, 24197.125, 24197.16796875,
    24197.208984375, 24197.25, 24197.291015625, 24197.333984375, 24197.375,
    24197.416015625, 24197.45703125, 24197.5, 24197.54296875,
    24197.583984375, 24197.625, 24197.666015625, 24197.708984375, 24197.75,
    24197.791015625, 24197.833984375, 24197.875, 24197.916015625,
    24197.958984375, 24198, 24198.041015625, 24198.08203125, 24198.125,
    24198.166015625, 24198.208984375, 24198.25, 24198.291015625,
    24198.333984375, 24198.375, 24198.416015625, 24198.45703125, 24198.5,
    24198.54296875, 24198.583984375, 24198.625, 24198.666015625,
    24198.708984375, 24198.75, 24198.791015625, 24198.83203125, 24198.875,
    24198.916015625, 24198.958984375, 24199, 24199.041015625, 24199.08203125,
    24199.125, 24199.16796875, 24199.208984375, 24199.25, 24199.291015625,
    24199.333984375, 24199.375, 24199.416015625, 24199.45703125, 24199.5,
    24199.54296875, 24199.583984375, 24199.625, 24199.666015625,
    24199.708984375, 24199.75, 24199.791015625, 24199.833984375, 24199.875,
    24199.916015625, 24199.958984375, 24200, 24200.041015625, 24200.08203125,
    24200.125, 24200.166015625, 24200.208984375, 24200.25, 24200.291015625,
    24200.333984375, 24200.375, 24200.416015625, 24200.45703125, 24200.5,
    24200.54296875, 24200.583984375, 24200.625, 24200.666015625,
    24200.708984375, 24200.75, 24200.791015625, 24200.83203125, 24200.875,
    24200.916015625, 24200.958984375, 24201, 24201.041015625, 24201.08203125,
    24201.125, 24201.16796875, 24201.208984375, 24201.25, 24201.291015625,
    24201.333984375, 24201.375, 24201.416015625, 24201.45703125, 24201.5,
    24201.54296875, 24201.583984375, 24201.625, 24201.666015625,
    24201.708984375, 24201.75, 24201.791015625, 24201.833984375, 24201.875,
    24201.916015625, 24201.958984375, 24202, 24202.041015625, 24202.08203125,
    24202.125, 24202.166015625, 24202.208984375, 24202.25, 24202.291015625,
    24202.333984375, 24202.375, 24202.416015625, 24202.45703125, 24202.5,
    24202.54296875, 24202.583984375, 24202.625, 24202.666015625,
    24202.708984375, 24202.75, 24202.791015625, 24202.83203125, 24202.875,
    24202.916015625, 24202.958984375, 24203, 24203.041015625, 24203.08203125,
    24203.125, 24203.16796875, 24203.208984375, 24203.25, 24203.291015625,
    24203.333984375, 24203.375, 24203.416015625, 24203.45703125, 24203.5,
    24203.54296875, 24203.583984375, 24203.625, 24203.666015625,
    24203.708984375, 24203.75, 24203.791015625, 24203.833984375, 24203.875,
    24203.916015625, 24203.958984375, 24204, 24204.041015625, 24204.08203125,
    24204.125, 24204.166015625, 24204.208984375, 24204.25, 24204.291015625,
    24204.333984375, 24204.375, 24204.416015625, 24204.45703125, 24204.5,
    24204.54296875, 24204.583984375, 24204.625, 24204.666015625,
    24204.708984375, 24204.75, 24204.791015625, 24204.83203125, 24204.875,
    24204.916015625, 24204.958984375, 24205, 24205.041015625, 24205.08203125,
    24205.125, 24205.16796875, 24205.208984375, 24205.25, 24205.291015625,
    24205.333984375, 24205.375, 24205.416015625, 24205.45703125, 24205.5,
    24205.54296875, 24205.583984375, 24205.625, 24205.666015625,
    24205.708984375, 24205.75, 24205.791015625, 24205.833984375, 24205.875,
    24205.916015625, 24205.958984375, 24206, 24206.041015625, 24206.08203125,
    24206.125, 24206.166015625, 24206.208984375, 24206.25, 24206.291015625,
    24206.333984375, 24206.375, 24206.416015625, 24206.45703125, 24206.5,
    24206.54296875, 24206.583984375, 24206.625, 24206.666015625,
    24206.708984375, 24206.75, 24206.791015625, 24206.83203125, 24206.875,
    24206.916015625, 24206.958984375, 24207, 24207.041015625, 24207.08203125,
    24207.125, 24207.16796875, 24207.208984375, 24207.25, 24207.291015625,
    24207.333984375, 24207.375, 24207.416015625, 24207.45703125, 24207.5,
    24207.54296875, 24207.583984375, 24207.625, 24207.666015625,
    24207.708984375, 24207.75, 24207.791015625, 24207.833984375, 24207.875,
    24207.916015625, 24207.958984375, 24208, 24208.041015625, 24208.08203125,
    24208.125, 24208.166015625, 24208.208984375, 24208.25, 24208.291015625,
    24208.333984375, 24208.375, 24208.416015625, 24208.45703125, 24208.5,
    24208.54296875, 24208.583984375, 24208.625, 24208.666015625,
    24208.708984375, 24208.75, 24208.791015625, 24208.83203125, 24208.875,
    24208.916015625, 24208.958984375, 24209, 24209.041015625, 24209.08203125,
    24209.125, 24209.16796875, 24209.208984375, 24209.25, 24209.291015625,
    24209.333984375, 24209.375, 24209.416015625, 24209.45703125, 24209.5,
    24209.54296875, 24209.583984375, 24209.625, 24209.666015625,
    24209.708984375, 24209.75, 24209.791015625, 24209.833984375, 24209.875,
    24209.916015625, 24209.958984375, 24210, 24210.041015625, 24210.08203125,
    24210.125, 24210.166015625, 24210.208984375, 24210.25, 24210.291015625,
    24210.333984375, 24210.375, 24210.416015625, 24210.45703125, 24210.5,
    24210.54296875, 24210.583984375, 24210.625, 24210.666015625,
    24210.708984375, 24210.75, 24210.791015625, 24210.83203125, 24210.875,
    24210.916015625, 24210.958984375, 24211, 24211.041015625, 24211.08203125,
    24211.125, 24211.16796875, 24211.208984375, 24211.25, 24211.291015625,
    24211.333984375, 24211.375, 24211.416015625, 24211.45703125, 24211.5,
    24211.54296875, 24211.583984375, 24211.625, 24211.666015625,
    24211.708984375, 24211.75, 24211.791015625, 24211.833984375, 24211.875,
    24211.916015625, 24211.958984375, 24212, 24212.041015625, 24212.08203125,
    24212.125, 24212.166015625, 24212.208984375, 24212.25, 24212.291015625,
    24212.333984375, 24212.375, 24212.416015625, 24212.45703125, 24212.5,
    24212.54296875, 24212.583984375, 24212.625, 24212.666015625,
    24212.708984375, 24212.75, 24212.791015625, 24212.83203125, 24212.875,
    24212.916015625, 24212.958984375, 24213, 24213.041015625, 24213.08203125,
    24213.125, 24213.16796875, 24213.208984375, 24213.25, 24213.291015625,
    24213.333984375, 24213.375, 24213.416015625, 24213.45703125, 24213.5,
    24213.54296875, 24213.583984375, 24213.625, 24213.666015625,
    24213.708984375, 24213.75, 24213.791015625, 24213.833984375, 24213.875,
    24213.916015625, 24213.958984375, 24214, 24214.041015625, 24214.08203125,
    24214.125, 24214.166015625, 24214.208984375, 24214.25, 24214.291015625,
    24214.333984375, 24214.375, 24214.416015625, 24214.45703125, 24214.5,
    24214.54296875, 24214.583984375, 24214.625, 24214.666015625,
    24214.708984375, 24214.75, 24214.791015625, 24214.83203125, 24214.875,
    24214.916015625, 24214.958984375, 24215, 24215.041015625, 24215.08203125,
    24215.125, 24215.16796875, 24215.208984375, 24215.25, 24215.291015625,
    24215.333984375, 24215.375, 24215.416015625, 24215.45703125, 24215.5,
    24215.54296875, 24215.583984375, 24215.625, 24215.666015625,
    24215.708984375, 24215.75, 24215.791015625, 24215.833984375, 24215.875,
    24215.916015625, 24215.958984375, 24216, 24216.041015625, 24216.08203125,
    24216.125, 24216.166015625, 24216.208984375, 24216.25, 24216.291015625,
    24216.333984375, 24216.375, 24216.416015625, 24216.45703125, 24216.5,
    24216.54296875, 24216.583984375, 24216.625, 24216.666015625,
    24216.708984375, 24216.75, 24216.791015625, 24216.83203125, 24216.875,
    24216.916015625, 24216.958984375, 24217, 24217.041015625, 24217.08203125,
    24217.125, 24217.16796875, 24217.208984375, 24217.25, 24217.291015625,
    24217.333984375, 24217.375, 24217.416015625, 24217.45703125, 24217.5,
    24217.54296875, 24217.583984375, 24217.625, 24217.666015625,
    24217.708984375, 24217.75, 24217.791015625, 24217.833984375, 24217.875,
    24217.916015625, 24217.958984375, 24218, 24218.041015625, 24218.08203125,
    24218.125, 24218.166015625, 24218.208984375, 24218.25, 24218.291015625,
    24218.333984375, 24218.375, 24218.416015625, 24218.45703125, 24218.5,
    24218.54296875, 24218.583984375, 24218.625, 24218.666015625,
    24218.708984375, 24218.75, 24218.791015625, 24218.83203125, 24218.875,
    24218.916015625, 24218.958984375, 24219, 24219.041015625, 24219.08203125,
    24219.125, 24219.16796875, 24219.208984375, 24219.25, 24219.291015625,
    24219.333984375, 24219.375, 24219.416015625, 24219.45703125, 24219.5,
    24219.54296875, 24219.583984375, 24219.625, 24219.666015625,
    24219.708984375, 24219.75, 24219.791015625, 24219.833984375, 24219.875,
    24219.916015625, 24219.958984375, 24220, 24220.041015625, 24220.08203125,
    24220.125, 24220.166015625, 24220.208984375, 24220.25, 24220.291015625,
    24220.333984375, 24220.375, 24220.416015625, 24220.45703125, 24220.5,
    24220.54296875, 24220.583984375, 24220.625, 24220.666015625,
    24220.708984375, 24220.75, 24220.791015625, 24220.83203125, 24220.875,
    24220.916015625, 24220.958984375, 24221, 24221.041015625, 24221.08203125,
    24221.125, 24221.16796875, 24221.208984375, 24221.25, 24221.291015625,
    24221.333984375, 24221.375, 24221.416015625, 24221.45703125, 24221.5,
    24221.54296875, 24221.583984375, 24221.625, 24221.666015625,
    24221.708984375, 24221.75, 24221.791015625, 24221.833984375, 24221.875,
    24221.916015625, 24221.958984375, 24222, 24222.041015625, 24222.08203125,
    24222.125, 24222.166015625, 24222.208984375, 24222.25, 24222.291015625,
    24222.333984375, 24222.375, 24222.416015625, 24222.45703125, 24222.5,
    24222.54296875, 24222.583984375, 24222.625, 24222.666015625,
    24222.708984375, 24222.75, 24222.791015625, 24222.83203125, 24222.875,
    24222.916015625, 24222.958984375, 24223, 24223.041015625, 24223.08203125,
    24223.125, 24223.16796875, 24223.208984375, 24223.25, 24223.291015625,
    24223.333984375, 24223.375, 24223.416015625, 24223.45703125, 24223.5,
    24223.54296875, 24223.583984375, 24223.625, 24223.666015625,
    24223.708984375, 24223.75, 24223.791015625, 24223.833984375, 24223.875,
    24223.916015625, 24223.958984375, 24224, 24224.041015625, 24224.08203125,
    24224.125, 24224.166015625, 24224.208984375, 24224.25, 24224.291015625,
    24224.333984375, 24224.375, 24224.416015625, 24224.45703125, 24224.5,
    24224.54296875, 24224.583984375, 24224.625, 24224.666015625,
    24224.708984375, 24224.75, 24224.791015625, 24224.83203125, 24224.875,
    24224.916015625, 24224.958984375, 24225, 24225.041015625, 24225.08203125,
    24225.125, 24225.16796875, 24225.208984375, 24225.25, 24225.291015625,
    24225.333984375, 24225.375, 24225.416015625, 24225.45703125, 24225.5,
    24225.54296875, 24225.583984375, 24225.625, 24225.666015625,
    24225.708984375, 24225.75, 24225.791015625, 24225.833984375, 24225.875,
    24225.916015625, 24225.958984375, 24226, 24226.041015625, 24226.08203125,
    24226.125, 24226.166015625, 24226.208984375, 24226.25, 24226.291015625,
    24226.333984375, 24226.375, 24226.416015625, 24226.45703125, 24226.5,
    24226.54296875, 24226.583984375, 24226.625, 24226.666015625,
    24226.708984375, 24226.75, 24226.791015625, 24226.83203125, 24226.875,
    24226.916015625, 24226.958984375, 24227, 24227.041015625, 24227.08203125,
    24227.125, 24227.16796875, 24227.208984375, 24227.25, 24227.291015625,
    24227.333984375, 24227.375, 24227.416015625, 24227.45703125, 24227.5,
    24227.54296875, 24227.583984375, 24227.625, 24227.666015625,
    24227.708984375, 24227.75, 24227.791015625, 24227.833984375, 24227.875,
    24227.916015625, 24227.958984375, 24228, 24228.041015625, 24228.08203125,
    24228.125, 24228.166015625, 24228.208984375, 24228.25, 24228.291015625,
    24228.333984375, 24228.375, 24228.416015625, 24228.45703125, 24228.5,
    24228.54296875, 24228.583984375, 24228.625, 24228.666015625,
    24228.708984375, 24228.75, 24228.791015625, 24228.83203125, 24228.875,
    24228.916015625, 24228.958984375, 24229, 24229.041015625, 24229.08203125,
    24229.125, 24229.16796875, 24229.208984375, 24229.25, 24229.291015625,
    24229.333984375, 24229.375, 24229.416015625, 24229.45703125, 24229.5,
    24229.54296875, 24229.583984375, 24229.625, 24229.666015625,
    24229.708984375, 24229.75, 24229.791015625, 24229.833984375, 24229.875,
    24229.916015625, 24229.958984375, 24230, 24230.041015625, 24230.08203125,
    24230.125, 24230.166015625, 24230.208984375, 24230.25, 24230.291015625,
    24230.333984375, 24230.375, 24230.416015625, 24230.45703125, 24230.5,
    24230.54296875, 24230.583984375, 24230.625, 24230.666015625,
    24230.708984375, 24230.75, 24230.791015625, 24230.83203125, 24230.875,
    24230.916015625, 24230.958984375, 24231, 24231.041015625, 24231.08203125,
    24231.125, 24231.16796875, 24231.208984375, 24231.25, 24231.291015625,
    24231.333984375, 24231.375, 24231.416015625, 24231.45703125, 24231.5,
    24231.54296875, 24231.583984375, 24231.625, 24231.666015625,
    24231.708984375, 24231.75, 24231.791015625, 24231.833984375, 24231.875,
    24231.916015625, 24231.958984375, 24232, 24232.041015625, 24232.08203125,
    24232.125, 24232.166015625, 24232.208984375, 24232.25, 24232.291015625,
    24232.333984375, 24232.375, 24232.416015625, 24232.45703125, 24232.5,
    24232.54296875, 24232.583984375, 24232.625, 24232.666015625,
    24232.708984375, 24232.75, 24232.791015625, 24232.83203125, 24232.875,
    24232.916015625, 24232.958984375, 24233, 24233.041015625, 24233.08203125,
    24233.125, 24233.16796875, 24233.208984375, 24233.25, 24233.291015625,
    24233.333984375, 24233.375, 24233.416015625, 24233.45703125, 24233.5,
    24233.54296875, 24233.583984375, 24233.625, 24233.666015625,
    24233.708984375, 24233.75, 24233.791015625, 24233.833984375, 24233.875,
    24233.916015625, 24233.958984375, 24234, 24234.041015625, 24234.08203125,
    24234.125, 24234.166015625, 24234.208984375, 24234.25, 24234.291015625,
    24234.333984375, 24234.375, 24234.416015625, 24234.45703125, 24234.5,
    24234.54296875, 24234.583984375, 24234.625, 24234.666015625,
    24234.708984375, 24234.75, 24234.791015625, 24234.83203125, 24234.875,
    24234.916015625, 24234.958984375, 24235, 24235.041015625, 24235.08203125,
    24235.125, 24235.16796875, 24235.208984375, 24235.25, 24235.291015625,
    24235.333984375, 24235.375, 24235.416015625, 24235.45703125, 24235.5,
    24235.54296875, 24235.583984375, 24235.625, 24235.666015625,
    24235.708984375, 24235.75, 24235.791015625, 24235.833984375, 24235.875,
    24235.916015625, 24235.958984375, 24236, 24236.041015625, 24236.08203125,
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ROMS couldn't read it correctly. So i cut the clima.nc file and now it works.

Thank you for your help.
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pmaccc
Posts: 74
Joined: Wed Oct 22, 2003 6:59 pm
Location: U. Wash., USA

Re: Error climatology file: not include initialization time

#6 Unread post by pmaccc »

I am having a related problem. I have a daily model run I do, which has worked fine the past 2 weeks. This morning it did not work because for some reason ROMS was looking for a bry file starting 1 second earlier than the one I made.

This is the error message in the log file:
CHECK_MULTIFILE - Error while processing Lateral Boundary multi-files:
data does not include initialization time = 18111 23:59:59

18112 00:00:00 18115 00:00:00 /gscratch/macc/parker/LiveOcean_output/sj0_v0/f2019.08.04/ocnN/ocean_bry.nc

and this is from earlier in the log file (this is what I expected because it is what I set):
18112.000 dstart Time-stamp assigned to model initialization (days)

In previous days of the exact same executable it always looked at the right time instead of 1 second early.

Any help would be greatly appreciated,
Parker
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User avatar
kate
Posts: 4091
Joined: Wed Jul 02, 2003 5:29 pm
Location: CFOS/UAF, USA

Re: Error climatology file: not include initialization time

#7 Unread post by kate »

Are you starting from a restart file? What is the time in that file? I have a Python script for changing the time(s) in a file because sometimes you just need to.
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