help:Compiling error

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backkom
Posts: 35
Joined: Wed Nov 07, 2007 5:03 pm
Location: Ocean University of China

help:Compiling error

#1 Unread post by backkom »

i am on a SGI workstation,The SGI workstation's Operating System is SUSE 9.0 which hasn't installed subversion.It has included GNU make 3.8 and perl, v5.8.3 built for ia64-linux-thread-multi.
i download roms source code with tortoiseSVN and the netcdf has been installed correctly ,but while compiling the source code ,the error as follows:
yaozhg@a330:~/romsyao> make
: No such file or directory
makefile:230: INCLUDING FILE Compilers/make_macros.mk WHICH CONTAINS APPLICATION-DEPENDENT MAKE DEFINITIONS
make: svnversion: Command not found
cp -f /lun/home/zw/netcdf/include/netcdf.mod Build
cp -f /lun/home/zw/netcdf/include/typesizes.mod Build
./ROMS/Bin/sfmakedepend --cpp --fext=f90 --file=- --objdir=Build -DROMS_HEADER="upwelling.h" -I ROMS/Include -I ROMS/Nonlinear -I ROMS/SeaIce -I ROMS/Utility -I ROMS/Drivers -I ROMS/Functionals -I Master --silent --moddir Build ROMS/Nonlinear/bbl.F ROMS/Nonlinear/bc_2d.F ROMS/Nonlinear/bc_3d.F ROMS/Nonlinear/biology.F ROMS/Nonlinear/bulk_flux.F ROMS/Nonlinear/bvf_mix.F ROMS/Nonlinear/conv_2d.F ROMS/Nonlinear/conv_3d.F ROMS/Nonlinear/diag.F ROMS/Nonlinear/exchange_2d.F ROMS/Nonlinear/exchange_3d.F ROMS/Nonlinear/forcing.F ROMS/Nonlinear/get_data.F ROMS/Nonlinear/get_idata.F ROMS/Nonlinear/gls_corstep.F ROMS/Nonlinear/gls_prestep.F ROMS/Nonlinear/hmixing.F ROMS/Nonlinear/ini_fields.F ROMS/Nonlinear/initial.F ROMS/Nonlinear/interp_floats.F ROMS/Nonlinear/lmd_bkpp.F ROMS/Nonlinear/lmd_skpp.F ROMS/Nonlinear/lmd_swfrac.F ROMS/Nonlinear/lmd_vmix.F ROMS/Nonlinear/main2d.F ROMS/Nonlinear/main3d.F ROMS/Nonlinear/mpdata_adiff.F ROMS/Nonlinear/my25_corstep.F ROMS/Nonlinear/my25_prestep.F ROMS/Nonlinear/obc_volcons.F ROMS/Nonlinear/omega.F ROMS/Nonlinear/output.F ROMS/Nonlinear/pre_step3d.F ROMS/Nonlinear/prsgrd.F ROMS/Nonlinear/radiation_stress.F ROMS/Nonlinear/rho_eos.F ROMS/Nonlinear/rhs3d.F ROMS/Nonlinear/sediment.F ROMS/Nonlinear/set_avg.F ROMS/Nonlinear/set_data.F ROMS/Nonlinear/set_depth.F ROMS/Nonlinear/set_massflux.F ROMS/Nonlinear/set_tides.F ROMS/Nonlinear/set_vbc.F ROMS/Nonlinear/set_zeta.F ROMS/Nonlinear/step2d.F ROMS/Nonlinear/step3d_t.F ROMS/Nonlinear/step3d_uv.F ROMS/Nonlinear/step_floats.F ROMS/Nonlinear/t3dbc_im.F ROMS/Nonlinear/t3dmix.F ROMS/Nonlinear/tkebc_im.F ROMS/Nonlinear/u2dbc_im.F ROMS/Nonlinear/u3dbc_im.F ROMS/Nonlinear/uv3dmix.F ROMS/Nonlinear/v2dbc_im.F ROMS/Nonlinear/v3dbc_im.F ROMS/Nonlinear/wvelocity.F ROMS/Nonlinear/zetabc.F ROMS/Functionals/analytical.F ROMS/SeaIce/seaice.F ROMS/Utility/abort.F ROMS/Utility/back_cost.F ROMS/Utility/back_cov.F ROMS/Utility/back_step.F ROMS/Utility/cgradient.F ROMS/Utility/checkdefs.F ROMS/Utility/checkerror.F ROMS/Utility/checkvars.F ROMS/Utility/close_io.F ROMS/Utility/congrad.F ROMS/Utility/cost_grad.F ROMS/Utility/cost_norm.F ROMS/Utility/def_avg.F ROMS/Utility/def_diags.F ROMS/Utility/def_floats.F ROMS/Utility/def_gst.F ROMS/Utility/def_hessian.F ROMS/Utility/def_his.F ROMS/Utility/def_impulse.F ROMS/Utility/def_info.F ROMS/Utility/def_ini.F ROMS/Utility/def_mod.F ROMS/Utility/def_norm.F ROMS/Utility/def_rst.F ROMS/Utility/def_station.F ROMS/Utility/def_tides.F ROMS/Utility/def_var.F ROMS/Utility/descent.F ROMS/Utility/distribute.F ROMS/Utility/dotproduct.F ROMS/Utility/downhill.F ROMS/Utility/extract_obs.F ROMS/Utility/extract_sta.F ROMS/Utility/frc_adjust.F ROMS/Utility/gasdev.F ROMS/Utility/get_2dfld.F ROMS/Utility/get_2dfldr.F ROMS/Utility/get_3dfld.F ROMS/Utility/get_3dfldr.F ROMS/Utility/get_bounds.F ROMS/Utility/get_cycle.F ROMS/Utility/get_date.F ROMS/Utility/get_grid.F ROMS/Utility/get_gst.F ROMS/Utility/get_ngfld.F ROMS/Utility/get_ngfldr.F ROMS/Utility/get_state.F ROMS/Utility/get_varcoords.F ROMS/Utility/grid_coords.F ROMS/Utility/impulse.F ROMS/Utility/ini_adjust.F ROMS/Utility/inp_par.F ROMS/Utility/interpolate.F ROMS/Utility/lubksb.F ROMS/Utility/ludcmp.F ROMS/Utility/metrics.F ROMS/Utility/mp_exchange.F ROMS/Utility/mp_routines.F ROMS/Utility/nf_fread2d.F ROMS/Utility/nf_fread3d.F ROMS/Utility/nf_fread4d.F ROMS/Utility/nf_fwrite2d.F ROMS/Utility/nf_fwrite3d.F ROMS/Utility/nf_fwrite4d.F ROMS/Utility/normalization.F ROMS/Utility/nrutil.F ROMS/Utility/obs_cost.F ROMS/Utility/obs_depth.F ROMS/Utility/obs_initial.F ROMS/Utility/obs_read.F ROMS/Utility/obs_scale.F ROMS/Utility/obs_write.F ROMS/Utility/oi_update.F ROMS/Utility/opencdf.F ROMS/Utility/packing.F ROMS/Utility/ran1.F ROMS/Utility/ran_state.F ROMS/Utility/regrid.F ROMS/Utility/set_2dfld.F ROMS/Utility/set_2dfldr.F ROMS/Utility/set_3dfld.F ROMS/Utility/set_3dfldr.F ROMS/Utility/set_diags.F ROMS/Utility/set_ngfld.F ROMS/Utility/set_ngfldr.F ROMS/Utility/set_scoord.F ROMS/Utility/set_weights.F ROMS/Utility/shapiro.F ROMS/Utility/state_addition.F ROMS/Utility/state_copy.F ROMS/Utility/state_dotprod.F ROMS/Utility/state_initialize.F ROMS/Utility/state_scale.F ROMS/Utility/stats_modobs.F ROMS/Utility/stiffness.F ROMS/Utility/timers.F ROMS/Utility/utility.F ROMS/Utility/white_noise.F ROMS/Utility/wpoints.F ROMS/Utility/wrt_avg.F ROMS/Utility/wrt_diags.F ROMS/Utility/wrt_floats.F ROMS/Utility/wrt_gst.F ROMS/Utility/wrt_hessian.F ROMS/Utility/wrt_his.F ROMS/Utility/wrt_info.F ROMS/Utility/wrt_ini.F ROMS/Utility/wrt_rst.F ROMS/Utility/wrt_station.F ROMS/Utility/wrt_tides.F ROMS/Modules/mod_arrays.F ROMS/Modules/mod_average.F ROMS/Modules/mod_bbl.F ROMS/Modules/mod_biology.F ROMS/Modules/mod_boundary.F ROMS/Modules/mod_clima.F ROMS/Modules/mod_coupler.F ROMS/Modules/mod_coupling.F ROMS/Modules/mod_diags.F ROMS/Modules/mod_eclight.F ROMS/Modules/mod_eoscoef.F ROMS/Modules/mod_floats.F ROMS/Modules/mod_forces.F ROMS/Modules/mod_fourdvar.F ROMS/Modules/mod_grid.F ROMS/Modules/mod_iounits.F ROMS/Modules/mod_kinds.F ROMS/Modules/mod_mixing.F ROMS/Modules/mod_ncparam.F ROMS/Modules/mod_nesting.F ROMS/Modules/mod_netcdf.F ROMS/Modules/mod_obs.F ROMS/Modules/mod_ocean.F ROMS/Modules/mod_parallel.F ROMS/Modules/mod_param.F ROMS/Modules/mod_scalars.F ROMS/Modules/mod_sediment.F ROMS/Modules/mod_sources.F ROMS/Modules/mod_stepping.F ROMS/Modules/mod_storage.F ROMS/Modules/mod_strings.F ROMS/Modules/mod_tides.F Master/esmf_roms.F Master/master.F Master/ocean_control.F Master/ocean_coupler.F Master/propagator.F Master/roms_export.F Master/roms_import.F > Build/MakeDepend
cp -p /lun/home/yaozhg/romsyao/Compilers/make_macros.mk Build
: No such file or directory
makefile:226: INCLUDING FILE Build/make_macros.mk WHICH CONTAINS APPLICATION-DEPENDENT MAKE DEFINITIONS
make: svnversion: Command not found
/usr/bin/cpp -P -traditional -DLINUX -DIA64 -DIFORT -D'ROOT_DIR="/lun/home/yaozhg/romsyao"' -DUPWELLING -D'HEADER="upwelling.h"' -D'ROMS_HEADER="upwelling.h"' -DNestedGrids=1 -D'ANALYTICAL_DIR="/lun/home/yaozhg/romsyao/ROMS/Functionals"' -D'SVN_REV=""' -IROMS/Include -IROMS/Nonlinear -IROMS/SeaIce -IROMS/Utility -IROMS/Drivers -IROMS/Functionals -IMaster -D'HEADER_DIR="./ROMS/Include"' ROMS/Nonlinear/bbl.F > Build/bbl.f90
ROMS/Bin/cpp_clean Build/bbl.f90
: No such file or directory
make: *** [Build/bbl.f90] Error 127


i don't know how to solve this error ,Any information is greatly appreciated.
thanks !

User avatar
kate
Posts: 4091
Joined: Wed Jul 02, 2003 5:29 pm
Location: CFOS/UAF, USA

#2 Unread post by kate »

I believe that you can safely ignore the subversion warnings. Files to check include Build/MakeDepend which should have lines like:

Code: Select all

Build/esmf_roms.o: cppdefs.h globaldefs.h loops.h
Build/esmf_roms.f90: cppdefs.h globaldefs.h loops.h
Build/esmf_roms.o: Build/distribute.o Build/mod_coupler.o Build/mod_forces.o
Build/esmf_roms.o: Build/mod_grid.o Build/mod_iounits.o Build/mod_ncparam.o
Build/esmf_roms.o: Build/mod_ocean.o Build/mod_parallel.o Build/mod_param.o
Build/esmf_roms.o: Build/mod_scalars.o Build/mod_stepping.o
Build/esmf_roms.o: Build/ocean_control.o Build/roms_import.o
Build/esmf_roms.o: Build/esmf_roms.f90
Also check Compilers/make_macros.mk or Build/make_macros.mk:

Code: Select all

  USE_ADJOINT :=
  USE_TANGENT :=
  USE_REPRESENTER :=
  USE_WRF :=
  USE_SWAN :=
  USE_REFDIF :=
  USE_ARPACK :=
  USE_MCT :=
  USE_ESMF :=

backkom
Posts: 35
Joined: Wed Nov 07, 2007 5:03 pm
Location: Ocean University of China

#3 Unread post by backkom »

thanks to kate for your reply !
i guess i have found why the trouble occurs.
i made a simple mistake that i download the roms on a windows system while compiling it on a linux system.the line ending difference between two systems perhaps leads to the error.
now when i download and compile the roms on the same system , it works very well .

again thanks for kate's reply! :D

feroda

#4 Unread post by feroda »

hi backkom, i met problems quit the same as yours. However, not enough as fortunate as you are.
i download the ROMS source code on fedora 7, and "scp" the model to IBM workstation to do the upwelling test. As a result, errors occured as you have encounterd.

could you give me some advice on how to do the test,especially the download, upload and compile process?

thanks!


david

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