Run problem!

[langlangxie]

after some seconds,the ROMS is broken.the problem is:

Lateral Boundary Conditions: NLM
============================

Variable Grid West Edge South Edge East Edge North Edge
--------- ---- ---------- ---------- ---------- ----------

zeta 1 Chapman Imp Chapman Imp Chapman Imp Chapman Imp

ubar 1 Flather Flather Flather Flather

vbar 1 Flather Flather Flather Flather

u 1 Rad + Nud Rad + Nud Rad + Nud Rad + Nud

v 1 Rad + Nud Rad + Nud Rad + Nud Rad + Nud

temp 1 Rad + Nud Rad + Nud Rad + Nud Rad + Nud

salt 1 Rad + Nud Rad + Nud Rad + Nud Rad + Nud

Basin information for Grid 01:

Maximum grid stiffness ratios: rx0 = 2.073358E-01 (Beckmann and Haidvogel)
rx1 = 5.496651E+00 (Haney)

Initial basin volumes: TotVolume = 7.4990725799E+15 m3
MinVolume = 1.3324713943E+08 m3
MaxVolume = 5.3901127752E+10 m3
Max/Min = 4.0451996181E+02

NL ROMS/TOMS: started time-stepping: (Grid: 01 TimeSteps: 00000001 - 00518400)

WRT_AVG - wrote averaged fields into time record = 0000004
GET_2DFLD - surface u-momentum stress, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.52879394E-05 Max = 6.40976909E-05)
GET_2DFLD - surface v-momentum stress, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -4.61810431E-06 Max = 5.52322843E-05)
GET_2DFLD - solar shortwave radiation flux, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 4.95683096E-05 Max = 6.59865548E-05)
GET_2DFLD - surface net heat flux, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.64383999E-06 Max = 3.50775806E-05)
GET_2DFLD - sea surface temperature climatology, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.42111849E+01 Max = 2.97641813E+01)
GET_2DFLD - surface net heat flux sensitivity to SST, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.19031127E-05 Max = -5.84449190E-06)
GET_2DFLD - surface net freswater flux, (E-P), t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.02026145E-07 Max = 3.25167561E-08)
GET_2DFLD - sea surface salinity climatology, t = 165 00:00:00
(Rec=0000006, Index=1, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.11149006E+01 Max = 3.46239759E+01)
GET_NGFLD - free-surface western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 5.60409472E-01 Max = 6.39023517E-01)
GET_NGFLD - free-surface eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 5.88852402E-01 Max = 1.04070739E+00)
GET_NGFLD - free-surface southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 5.88852402E-01 Max = 6.77450558E-01)
GET_NGFLD - free-surface northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.50057099E-01 Max = 6.32251028E-01)
GET_NGFLD - 2D u-momentum western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -4.90975438E-02 Max = 1.05009940E-01)
GET_NGFLD - 2D v-momentum western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.01857701E-01 Max = 7.76587735E-02)
GET_NGFLD - 2D u-momentum eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -2.90631022E-01 Max = 1.05943795E-01)
GET_NGFLD - 2D v-momentum eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -7.84070213E-02 Max = 7.51479399E-02)
GET_NGFLD - 2D u-momentum southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -9.49848125E-02 Max = 2.23045097E-02)
GET_NGFLD - 2D v-momentum southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -4.46944747E-02 Max = 9.61045627E-02)
GET_NGFLD - 2D u-momentum northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -5.24680274E-02 Max = 9.89935547E-02)
GET_NGFLD - 2D v-momentum northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.81153644E-03 Max = 1.36988327E-01)
GET_NGFLD - 3D u-momentum western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -8.38915360E-02 Max = 1.98316200E-01)
GET_NGFLD - 3D v-momentum western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.86986273E-01 Max = 1.42603979E-01)
GET_NGFLD - 3D u-momentum eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -8.34006718E-01 Max = 4.99532897E-01)
GET_NGFLD - 3D v-momentum eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -3.91903841E-01 Max = 3.54905029E-01)
GET_NGFLD - 3D u-momentum southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.74823680E-01 Max = 8.80813603E-02)
GET_NGFLD - 3D v-momentum southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -3.26053837E-01 Max = 2.74518056E-01)
GET_NGFLD - 3D u-momentum northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -8.21044156E-02 Max = 2.58711342E-01)
GET_NGFLD - 3D v-momentum northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -4.70567820E-02 Max = 2.17430385E-01)
GET_NGFLD - temperature western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.64734438E+01 Max = 3.04281569E+01)
GET_NGFLD - salinity western boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.16394171E+01 Max = 3.36542383E+01)
GET_NGFLD - temperature eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 1.19861020E+00 Max = 2.97552779E+01)
GET_NGFLD - salinity eastern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.36431738E+01 Max = 3.48619570E+01)
GET_NGFLD - temperature southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.86765619E+00 Max = 3.04214697E+01)
GET_NGFLD - salinity southern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.21528550E+01 Max = 3.47526188E+01)
GET_NGFLD - temperature northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 6.81671213E+00 Max = 2.71948512E+01)
GET_NGFLD - salinity northern boundary condition, t = 165 00:00:00
(Rec=0000006, Index=2, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.21829639E+01 Max = 3.47287497E+01)
WRT_AVG - wrote averaged fields into time record = 0000005
GET_2DFLD - surface u-momentum stress, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.05936577E-05 Max = 7.39921924E-05)
GET_2DFLD - surface v-momentum stress, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 6.88273658E-06 Max = 5.83811057E-05)
GET_2DFLD - solar shortwave radiation flux, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 4.99713362E-05 Max = 7.10750755E-05)
GET_2DFLD - surface net heat flux, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -3.80987919E-06 Max = 4.56062488E-05)
GET_2DFLD - sea surface temperature climatology, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.66514053E+01 Max = 2.96063976E+01)
GET_2DFLD - surface net heat flux sensitivity to SST, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.22702114E-05 Max = -5.99364157E-06)
GET_2DFLD - surface net freswater flux, (E-P), t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.26891164E-07 Max = 4.74972469E-08)
GET_2DFLD - sea surface salinity climatology, t = 195 00:00:00
(Rec=0000007, Index=2, File: scs_frc.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.15641003E+01 Max = 3.45120414E+01)
GET_NGFLD - free-surface western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 5.41284062E-01 Max = 6.26281486E-01)
GET_NGFLD - free-surface eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 5.85367811E-01 Max = 1.08700983E+00)
GET_NGFLD - free-surface southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 5.85367811E-01 Max = 6.75306109E-01)
GET_NGFLD - free-surface northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 1.93854451E-01 Max = 6.64718183E-01)
GET_NGFLD - 2D u-momentum western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -5.21068446E-02 Max = 1.20445283E-01)
GET_NGFLD - 2D v-momentum western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.15020468E-01 Max = 1.00295033E-01)
GET_NGFLD - 2D u-momentum eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -2.62560567E-01 Max = 1.10089264E-01)
GET_NGFLD - 2D v-momentum eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -7.81628386E-02 Max = 7.95966388E-02)
GET_NGFLD - 2D u-momentum southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -1.23535612E-01 Max = 2.18107207E-02)
GET_NGFLD - 2D v-momentum southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -5.50588877E-02 Max = 1.13645397E-01)
GET_NGFLD - 2D u-momentum northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -6.20944778E-02 Max = 8.88765042E-02)
GET_NGFLD - 2D v-momentum northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 6.01659993E-03 Max = 1.88722315E-01)
GET_NGFLD - 3D u-momentum western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -8.98586236E-02 Max = 2.28061184E-01)
GET_NGFLD - 3D v-momentum western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -2.12672031E-01 Max = 1.76295640E-01)
GET_NGFLD - 3D u-momentum eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -7.58688083E-01 Max = 5.41575720E-01)
GET_NGFLD - 3D v-momentum eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -3.89539775E-01 Max = 3.81860148E-01)
GET_NGFLD - 3D u-momentum southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -2.26398974E-01 Max = 6.73357726E-02)
GET_NGFLD - 3D v-momentum southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -3.24876498E-01 Max = 3.03098959E-01)
GET_NGFLD - 3D u-momentum northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -9.38644844E-02 Max = 2.60052975E-01)
GET_NGFLD - 3D v-momentum northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = -4.93375862E-02 Max = 2.31014726E-01)
GET_NGFLD - temperature western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.58768280E+01 Max = 3.00370776E+01)
GET_NGFLD - salinity western boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.17351468E+01 Max = 3.38036455E+01)
GET_NGFLD - temperature eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 1.19836398E+00 Max = 2.97644582E+01)
GET_NGFLD - salinity eastern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.36719047E+01 Max = 3.48471544E+01)
GET_NGFLD - temperature southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 2.86867930E+00 Max = 3.00368819E+01)
GET_NGFLD - salinity southern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.23155646E+01 Max = 3.47614262E+01)
GET_NGFLD - temperature northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 6.76454056E+00 Max = 2.86756648E+01)
GET_NGFLD - salinity northern boundary condition, t = 195 00:00:00
(Rec=0000007, Index=1, File: scs_bry_Y2001M1.nc)
(Tmin= 15.0000 Tmax= 345.0000)
(Min = 3.34817645E+01 Max = 3.47158838E+01)

WRT_AVG - error while writing variable: zeta
into averages NetCDF file for time record: 6

can everyone help me to solve the problem?
thanks in advance!

[justina0622]

Did you just update to a new version of ROMS? If that's the situation, you can read this thread[viewtopic.php?f=14&t=2511]. This happened to me before, but my simulation broken at the very beginning. So before updating your compiler, you can turn off the average output of ubar, vbar and zeta to make sure that is the problem.
Qianqian

[langlangxie]

Did you just update to a new version of ROMS? If that's the situation, you can read this thread[viewtopic.php?f=14&t=2511]. This happened to me before, but my simulation broken at the very beginning. So before updating your compiler, you can turn off the average output of ubar, vbar and zeta to make sure that is the problem.
Qianqian

Thanks！
I will have a try！