Code: Select all
Resolution, Grid 01: 0302x0145x030, Parallel Nodes: 16, Tiling: 004x004
Physical Parameters, Grid: 01
=============================
4000 ntimes Number of timesteps for 3-D equations.
100.000 dt Timestep size (s) for 3-D equations.
30 ndtfast Number of timesteps for 2-D equations between
each 3D timestep.
1 ERstr Starting ensemble/perturbation run number.
1 ERend Ending ensemble/perturbation run number.
0 nrrec Number of restart records to read from disk.
T LcycleRST Switch to recycle time-records in restart file.
288 nRST Number of timesteps between the writing of data
into restart fields.
1 ninfo Number of timesteps between print of information
to standard output.
9 nSTA Number of timesteps between the writing of data
the stations file.
T ldefout Switch to create a new output NetCDF file(s).
9 nHIS Number of timesteps between the writing fields
into history file.
1 ntsAVG Starting timestep for the accumulation of output
time-averaged data.
9 nAVG Number of timesteps between the writing of
time-averaged data into averages file.
1 ntsDIA Starting timestep for the accumulation of output
time-averaged diagnostics data.
9 nDIA Number of timesteps between the writing of
time-averaged data into diagnostics file.
0.0000E+00 nl_tnu2(01) NLM Horizontal, harmonic mixing coefficient
(m2/s) for tracer 01: temp
0.0000E+00 nl_tnu2(02) NLM Horizontal, harmonic mixing coefficient
(m2/s) for tracer 02: salt
5.0000E+00 nl_visc2 NLM Horizontal, harmonic mixing coefficient
(m2/s) for momentum.
1.0000E-06 Akt_bak(01) Background vertical mixing coefficient (m2/s)
for tracer 01: temp
1.0000E-06 Akt_bak(02) Background vertical mixing coefficient (m2/s)
for tracer 02: salt
1.0000E-05 Akv_bak Background vertical mixing coefficient (m2/s)
for momentum.
5.0000E-06 Akk_bak Background vertical mixing coefficient (m2/s)
for turbulent energy.
5.0000E-06 Akp_bak Background vertical mixing coefficient (m2/s)
for turbulent generic statistical field.
3.0000E-04 rdrg Linear bottom drag coefficient (m/s).
3.0000E-03 rdrg2 Quadratic bottom drag coefficient.
2.0000E-02 Zob Bottom roughness (m).
2 Vtransform S-coordinate transformation equation.
4 Vstretching S-coordinate stretching function.
3.0000E+00 theta_s S-coordinate surface control parameter.
0.0000E+00 theta_b S-coordinate bottom control parameter.
25.000 Tcline S-coordinate surface/bottom layer width (m) used
in vertical coordinate stretching.
1025.000 rho0 Mean density (kg/m3) for Boussinesq approximation.
0.000 dstart Time-stamp assigned to model initialization (days).
0.00 time_ref Reference time for units attribute (yyyymmdd.dd)
0.0000E+00 Tnudg(01) Nudging/relaxation time scale (days)
for tracer 01: temp
0.0000E+00 Tnudg(02) Nudging/relaxation time scale (days)
for tracer 02: salt
0.0000E+00 Znudg Nudging/relaxation time scale (days)
for free-surface.
0.0000E+00 M2nudg Nudging/relaxation time scale (days)
for 2D momentum.
0.0000E+00 M3nudg Nudging/relaxation time scale (days)
for 3D momentum.
0.0000E+00 obcfac Factor between passive and active
open boundary conditions.
F VolCons(1) NLM western edge boundary volume conservation.
F VolCons(2) NLM southern edge boundary volume conservation.
F VolCons(3) NLM eastern edge boundary volume conservation.
F VolCons(4) NLM northern edge boundary volume conservation.
14.000 T0 Background potential temperature (C) constant.
35.000 S0 Background salinity (PSU) constant.
1027.000 R0 Background density (kg/m3) used in linear Equation
of State.
1.7000E-04 Tcoef Thermal expansion coefficient (1/Celsius).
0.0000E+00 Scoef Saline contraction coefficient (1/PSU).
1.000 gamma2 Slipperiness variable: free-slip (1.0) or
no-slip (-1.0).
T Hout(idFsur) Write out free-surface.
T Hout(idUvel) Write out 3D U-momentum component.
T Hout(idVvel) Write out 3D V-momentum component.
Output/Input Files:
Output Restart File: /home/austinj/gloegel/roms-models/model-001/Output/model-001_rst.nc
Output History File: /home/austinj/gloegel/roms-models/model-001/Output/model-001_his.nc
Output Averages File: /home/austinj/gloegel/roms-models/model-001/Output/model-001_avg.nc
Output Diagnostics File: /home/austinj/gloegel/roms-models/model-001/Output/model-001_dia.nc
Output Stations File: /home/austinj/gloegel/roms-models/model-001/Output/model-001_sta.nc
Input Grid File: /home/austinj/gloegel/roms-grids/LS_grid_2km.nc
Station positions File: /home/austinj/gloegel/roms-models/model-001/run-files/stations.in
Tile partition information for Grid 01: 0302x0145x0030 tiling: 004x004
tile Istr Iend Jstr Jend Npts
0 1 75 1 36 81000
1 76 151 1 36 82080
2 152 227 1 36 82080
3 228 302 1 36 81000
4 1 75 37 73 83250
5 76 151 37 73 84360
6 152 227 37 73 84360
7 228 302 37 73 83250
8 1 75 74 110 83250
9 76 151 74 110 84360
10 152 227 74 110 84360
11 228 302 74 110 83250
12 1 75 111 145 78750
13 76 151 111 145 79800
14 152 227 111 145 79800
15 228 302 111 145 78750
Tile minimum and maximum fractional grid coordinates:
(interior points only)
tile Xmin Xmax Ymin Ymax grid
0 0.50 75.50 0.50 36.50 RHO-points
1 75.50 151.50 0.50 36.50 RHO-points
2 151.50 227.50 0.50 36.50 RHO-points
3 227.50 302.50 0.50 36.50 RHO-points
4 0.50 75.50 36.50 73.50 RHO-points
5 75.50 151.50 36.50 73.50 RHO-points
6 151.50 227.50 36.50 73.50 RHO-points
7 227.50 302.50 36.50 73.50 RHO-points
8 0.50 75.50 73.50 110.50 RHO-points
9 75.50 151.50 73.50 110.50 RHO-points
10 151.50 227.50 73.50 110.50 RHO-points
11 227.50 302.50 73.50 110.50 RHO-points
12 0.50 75.50 110.50 145.50 RHO-points
13 75.50 151.50 110.50 145.50 RHO-points
14 151.50 227.50 110.50 145.50 RHO-points
15 227.50 302.50 110.50 145.50 RHO-points
0 1.00 75.50 0.50 36.50 U-points
1 75.50 151.50 0.50 36.50 U-points
2 151.50 227.50 0.50 36.50 U-points
3 227.50 302.00 0.50 36.50 U-points
4 1.00 75.50 36.50 73.50 U-points
5 75.50 151.50 36.50 73.50 U-points
6 151.50 227.50 36.50 73.50 U-points
7 227.50 302.00 36.50 73.50 U-points
8 1.00 75.50 73.50 110.50 U-points
9 75.50 151.50 73.50 110.50 U-points
10 151.50 227.50 73.50 110.50 U-points
11 227.50 302.00 73.50 110.50 U-points
12 1.00 75.50 110.50 145.50 U-points
13 75.50 151.50 110.50 145.50 U-points
14 151.50 227.50 110.50 145.50 U-points
15 227.50 302.00 110.50 145.50 U-points
0 0.50 75.50 1.00 36.50 V-points
1 75.50 151.50 1.00 36.50 V-points
2 151.50 227.50 1.00 36.50 V-points
3 227.50 302.50 1.00 36.50 V-points
4 0.50 75.50 36.50 73.50 V-points
5 75.50 151.50 36.50 73.50 V-points
6 151.50 227.50 36.50 73.50 V-points
7 227.50 302.50 36.50 73.50 V-points
8 0.50 75.50 73.50 110.50 V-points
9 75.50 151.50 73.50 110.50 V-points
10 151.50 227.50 73.50 110.50 V-points
11 227.50 302.50 73.50 110.50 V-points
12 0.50 75.50 110.50 145.00 V-points
13 75.50 151.50 110.50 145.00 V-points
14 151.50 227.50 110.50 145.00 V-points
15 227.50 302.50 110.50 145.00 V-points
Maximum halo size in XI and ETA directions:
HaloSizeI(1) = 264
HaloSizeJ(1) = 147
TileSide(1) = 82
TileSize(1) = 3526
Stations Parameters, Grid: 01
=============================
3 Nstation Number of stations to write out into stations file.
T Sout(idTvar) Write out tracer 01: temp
T Sout(idUsms) Write out surface U-momentum stress.
T Sout(idVsms) Write out surface V-momentum stress.
Flag and positions for station 0001: 0 80.0000 40.0000
Flag and positions for station 0002: 0 80.0000 30.0000
Flag and positions for station 0003: 0 80.0000 20.0000
Lateral Boundary Conditions: NLM
============================
Variable Grid West Edge South Edge East Edge North Edge
--------- ---- ---------- ---------- ---------- ----------
zeta 1 Periodic Closed Periodic Closed
ubar 1 Periodic Closed Periodic Closed
vbar 1 Periodic Closed Periodic Closed
u 1 Periodic Closed Periodic Closed
v 1 Periodic Closed Periodic Closed
temp 1 Periodic Closed Periodic Closed
salt 1 Periodic Closed Periodic Closed
tke 1 Periodic Closed Periodic Closed
Activated C-preprocessing Options:
UPWELLING Wind-Driven Upwelling/Downwelling over a Periodic Channel
ANA_BSFLUX Analytical kinematic bottom salinity flux.
ANA_BTFLUX Analytical kinematic bottom temperature flux.
ANA_INITIAL Analytical initial conditions.
ANA_SMFLUX Analytical kinematic surface momentum flux.
ANA_SSFLUX Analytical kinematic surface salinity flux.
ANA_STFLUX Analytical kinematic surface temperature flux.
ASSUMED_SHAPE Using assumed-shape arrays.
AVERAGES Writing out time-averaged nonlinear model fields.
DIAGNOSTICS_TS Computing and writing tracer diagnostic terms.
DIAGNOSTICS_UV Computing and writing momentum diagnostic terms.
DJ_GRADPS Parabolic Splines density Jacobian (Shchepetkin, 2002).
DOUBLE_PRECISION Double precision arithmetic.
MASKING Land/Sea masking.
MIX_S_TS Mixing of tracers along constant S-surfaces.
MIX_S_UV Mixing of momentum along constant S-surfaces.
MPI MPI distributed-memory configuration.
MY25_MIXING Mellor/Yamada Level-2.5 mixing closure.
NONLINEAR Nonlinear Model.
!NONLIN_EOS Linear Equation of State for seawater.
POWER_LAW Power-law shape time-averaging barotropic filter.
PROFILE Time profiling activated .
K_GSCHEME Third-order upstream advection of TKE fields.
!RST_SINGLE Double precision fields in restart NetCDF file.
SALINITY Using salinity.
SOLVE3D Solving 3D Primitive Equations.
SPLINES Conservative parabolic spline reconstruction.
STATIONS Writing out station data.
TS_U3HADVECTION Third-order upstream horizontal advection of tracers.
TS_C4VADVECTION Fourth-order centered vertical advection of tracers.
TS_DIF2 Harmonic mixing of tracers.
UV_ADV Advection of momentum.
UV_COR Coriolis term.
UV_U3HADVECTION Third-order upstream horizontal advection of 3D momentum.
UV_C4VADVECTION Fourth-order centered vertical advection of momentum.
UV_LDRAG Linear bottom stress.
UV_VIS2 Harmonic mixing of momentum.
VAR_RHO_2D Variable density barotropic mode.
Process Information:
Node # 0 (pid= 1871) is active.
Node # 3 (pid= 1874) is active.
Node # 5 (pid= 1876) is active.
Node # 1 (pid= 1872) is active.
Node # 2 (pid= 1873) is active.
Node # 4 (pid= 1875) is active.
Node # 6 (pid= 1877) is active.
Node # 7 (pid= 1878) is active.
Node # 8 (pid= 16684) is active.
Node # 9 (pid= 16685) is active.
Node # 10 (pid= 16686) is active.
Node # 11 (pid= 16687) is active.
Node # 12 (pid= 16688) is active.
Node # 13 (pid= 16689) is active.
Node # 14 (pid= 16690) is active.
Node # 15 (pid= 16691) is active.
INITIAL: Configuring and initializing forward nonlinear model ...
reading f
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Vertical S-coordinate System:
level S-coord Cs-curve Z at hmin at hc half way at hmax
30 0.0000000 0.0000000 0.000 0.000 0.000 0.000
29 -0.0333333 -0.0005519 -0.032 -0.424 -0.840 -0.993
28 -0.0666667 -0.0022130 -0.064 -0.861 -1.879 -2.407
27 -0.1000000 -0.0050000 -0.096 -1.313 -3.120 -4.246
26 -0.1333333 -0.0089408 -0.129 -1.778 -4.568 -6.522
25 -0.1666667 -0.0140748 -0.161 -2.259 -6.230 -9.250
24 -0.2000000 -0.0204535 -0.193 -2.756 -8.115 -12.448
23 -0.2333333 -0.0281406 -0.225 -3.268 -10.234 -16.142
22 -0.2666667 -0.0372130 -0.258 -3.798 -12.602 -20.360
21 -0.3000000 -0.0477616 -0.290 -4.347 -15.234 -25.137
20 -0.3333333 -0.0598920 -0.323 -4.915 -18.150 -30.512
19 -0.3666667 -0.0737256 -0.355 -5.505 -21.371 -36.532
18 -0.4000000 -0.0894007 -0.388 -6.118 -24.922 -43.249
17 -0.4333333 -0.1070744 -0.421 -6.755 -28.832 -50.723
16 -0.4666667 -0.1269234 -0.454 -7.420 -33.131 -59.020
15 -0.5000000 -0.1491465 -0.487 -8.114 -37.856 -68.215
14 -0.5333333 -0.1739660 -0.520 -8.841 -43.047 -78.392
13 -0.5666667 -0.2016303 -0.553 -9.604 -48.747 -89.647
12 -0.6000000 -0.2324164 -0.586 -10.405 -55.007 -102.083
11 -0.6333333 -0.2666323 -0.619 -11.250 -61.882 -115.817
10 -0.6666667 -0.3046205 -0.653 -12.141 -69.433 -130.979
9 -0.7000000 -0.3467612 -0.686 -13.085 -77.729 -147.712
8 -0.7333333 -0.3934761 -0.720 -14.085 -86.844 -166.176
7 -0.7666667 -0.4452328 -0.754 -15.149 -96.863 -186.549
6 -0.8000000 -0.5025493 -0.789 -16.282 -107.879 -209.026
5 -0.8333333 -0.5659992 -0.823 -17.492 -119.995 -233.824
4 -0.8666667 -0.6362176 -0.858 -18.786 -133.323 -261.183
3 -0.9000000 -0.7139071 -0.893 -20.174 -147.991 -291.371
2 -0.9333333 -0.7998455 -0.928 -21.665 -164.138 -324.680
1 -0.9666667 -0.8948927 -0.964 -23.269 -181.917 -361.436
0 -1.0000000 -1.0000000 -1.000 -25.000 -201.500 -402.000
Time Splitting Weights: ndtfast = 30 nfast = 42
Primary Secondary Accumulated to Current Step
1-0.0008094437383769 0.0333333333333333-0.0008094437383769 0.0333333333333333
2-0.0014053566728197 0.0333603147912792-0.0022148004111966 0.0666936481246126
3-0.0017877524645903 0.0334071600137066-0.0040025528757869 0.1001008081383191
4-0.0019566842408176 0.0334667517625262-0.0059592371166046 0.1335675599008453
5-0.0019122901320372 0.0335319745705535-0.0078715272486418 0.1670995344713988
6-0.0016548570247459 0.0335957175749547-0.0095263842733877 0.2006952520463536
7-0.0011849025289723 0.0336508794757796-0.0107112868023600 0.2343461315221331
8-0.0005032751608631 0.0336903762267453-0.0112145619632232 0.2680365077488784
9 0.0003887272597151 0.0337071520654408-0.0108258347035081 0.3017436598143192
10 0.0014892209965583 0.0336941944901169-0.0093366137069498 0.3354378543044362
11 0.0027955815694920 0.0336445537902317-0.0065410321374578 0.3690824080946679
12 0.0043042707117221 0.0335513677379153-0.0022367614257356 0.4026337758325831
13 0.0060106451121704 0.0334078920475245 0.0037738836864348 0.4360416678801076
14 0.0079087469427945 0.0332075372104522 0.0116826306292293 0.4692492050905598
15 0.0099910761708920 0.0329439123123590 0.0216737068001213 0.5021931174029188
16 0.0122483446563884 0.0326108764399960 0.0339220514565097 0.5348039938429148
17 0.0146692120341107 0.0322025982847830 0.0485912634906204 0.5670065921276978
18 0.0172400033810439 0.0317136245503127 0.0658312668716643 0.5987202166780105
19 0.0199444086685725 0.0311389577709445 0.0857756755402368 0.6298591744489550
20 0.0227631639997064 0.0304741441486588 0.1085388395399432 0.6603333185976138
21 0.0256737146312911 0.0297153720153352 0.1342125541712342 0.6900486906129490
22 0.0286498597812016 0.0288595815276255 0.1628624139524359 0.7189082721405746
23 0.0316613792205220 0.0279045862015855 0.1945237931729578 0.7468128583421600
24 0.0346736416507075 0.0268492068942347 0.2291974348236653 0.7736620652363948
25 0.0376471948657328 0.0256934188392112 0.2668446296893981 0.7993554840756060
26 0.0405373376992232 0.0244385123436867 0.3073819673886213 0.8237939964192927
27 0.0432936737565710 0.0230872677537126 0.3506756411451924 0.8468812641730054
28 0.0458596469320356 0.0216441452951603 0.3965352880772280 0.8685254094681656
29 0.0481720587108284 0.0201154903974257 0.4447073467880565 0.8886408998655914
30 0.0501605672561820 0.0185097551070648 0.4948679140442384 0.9071506549726561
31 0.0517471682814030 0.0168377361985254 0.5466150823256415 0.9239883911711815
32 0.0528456577069106 0.0151128305891453 0.5994607400325521 0.9391012217603267
33 0.0533610761022577 0.0133513086655816 0.6528218161348098 0.9524525304259084
34 0.0531891349131379 0.0115726061288397 0.7060109510479478 0.9640251365547481
35 0.0522156244733761 0.0097996349650684 0.7582265755213239 0.9738247715198165
36 0.0503158038019030 0.0080591141492892 0.8085423793232269 0.9818838856691057
37 0.0473537721847153 0.0063819206892258 0.8558961515079423 0.9882658063583315
38 0.0431818225418188 0.0048034616164019 0.8990779740497611 0.9930692679747334
39 0.0376397765791564 0.0033640675316746 0.9367177506289175 0.9964333355064080
40 0.0305543017255206 0.0021094083123694 0.9672720523544381 0.9985427438187774
41 0.0217382098544504 0.0010909315881854 0.9890102622088885 0.9996336754069628
42 0.0109897377911118 0.0003663245930371 1.0000000000000004 0.9999999999999999
ndtfast, nfast = 30 42 nfast/ndtfast = 1.40000
Centers of gravity and integrals (values must be 1, 1, approx 1/2, 1, 1):
1.000000000000 1.047601458608 0.523800729304 1.000000000000 1.000000000000
Power filter parameters, Fgamma, gamma = 0.28400 0.18933
Minimum X-grid spacing, DXmin = 2.00000000E+00 km
Maximum X-grid spacing, DXmax = 2.00000000E+00 km
Minimum Y-grid spacing, DYmin = 2.00000000E+00 km
Maximum Y-grid spacing, DYmax = 2.00000000E+00 km
Minimum Z-grid spacing, DZmin = 3.20725078E-02 m
Maximum Z-grid spacing, DZmax = 4.05638507E+01 m
Minimum barotropic Courant Number = 7.38241153E-03
Maximum barotropic Courant Number = 1.48016891E-01
Maximum Coriolis Courant Number = 1.10000000E-02
Maximum grid stiffness ratios: rx0 = 9.682540E-01 (Beckmann and Haidvogel)
rx1 = 2.974274E+01 (Haney)
Initial basin volumes: TotVolume = 1.1818404000E+13 m3
MinVolume = 1.2829003124E+05 m3
MaxVolume = 1.6225540264E+08 m3
Max/Min = 1.2647545649E+03
NL ROMS/TOMS: started time-stepping: (Grid: 01 TimeSteps: 00000001 - 00004000)
STEP Day HH:MM:SS KINETIC_ENRG POTEN_ENRG TOTAL_ENRG NET_VOLUME
C => (i,j,k) Cu Cv Cw Max Speed
0 0 00:00:00 0.000000E+00 8.702628E+02 8.702628E+02 1.228302E+13
(000,000,00) 0.000000E+00 0.000000E+00 0.000000E+00 0.000000E+00
DEF_HIS - creating history file: /home/austinj/gloegel/roms-models/model-001/Output/model-001_his.nc
WRT_HIS - wrote history fields (Index=1,1) into time record = 0000001
DEF_AVG - creating average file: /home/austinj/gloegel/roms-models/model-001/Output/model-001_avg.nc
DEF_DIAGS - creating diagnostics file: /home/austinj/gloegel/roms-models/model-001/Output/model-001_dia.nc
DEF_STATION - creating stations file: /home/austinj/gloegel/roms-models/model-001/Output/model-001_sta.nc
1 0 00:01:40 2.294946E-04 8.702606E+02 8.702608E+02 1.228258E+13
(113,086,01) 2.467573E-02 2.539287E-02 0.000000E+00 1.135981E+00
2 0 00:03:20 7.700370E-04 8.702543E+02 8.702551E+02 1.228156E+13
(111,096,01) 3.220059E-02 4.033535E-02 4.664799E+01 2.059685E+00
3 0 00:05:00 1.530783E-03 8.702329E+02 8.702345E+02 1.228025E+13
(111,096,01) 5.648131E-02 6.783622E-02 8.453411E+01 2.789785E+00
4 0 00:06:40 2.470958E-03 8.701939E+02 8.701964E+02 1.227881E+13
(111,096,01) 8.368497E-02 9.658389E-02 1.121651E+02 3.431938E+00
5 0 00:08:20 3.557556E-03 8.701424E+02 8.701460E+02 1.227733E+13
(111,096,01) 1.083242E-01 1.223930E-01 1.316511E+02 3.963897E+00
6 0 00:10:00 4.755493E-03 8.700833E+02 8.700880E+02 1.227585E+13
(111,096,01) 1.285067E-01 1.426415E-01 1.431047E+02 4.765708E+00
7 0 00:11:40 6.035806E-03 8.700189E+02 8.700249E+02 1.227440E+13
(111,096,01) 1.460593E-01 1.607027E-01 1.469665E+02 6.306291E+00
8 0 00:13:20 7.936571E-03 8.699506E+02 8.699586E+02 1.227296E+13
(111,096,01) 1.602873E-01 1.783562E-01 1.490090E+02 2.462400E+01
Blowing-up: Saving latest model state into RESTART file
Node # 6 CPU: 15.849
Node # 5 CPU: 16.202
Node # 1 CPU: 17.056
Node # 7 CPU: 16.050
Node # 2 CPU: 17.246
Node # 3 CPU: 17.195
Node # 4 CPU: 16.399
WRT_RST - wrote re-start fields (Index=1,1) into time record = 0000001
Elapsed CPU time (seconds):
Node # 0 CPU: 15.668
Node # 14 CPU: 16.701
Node # 15 CPU: 16.095
Node # 9 CPU: 16.065
Node # 8 CPU: 15.173
Node # 11 CPU: 16.406
Node # 12 CPU: 17.201
Node # 13 CPU: 17.160
Node # 10 CPU: 15.873
ROMS/TOMS - Output NetCDF summary for Grid 01:
number of time records written in HISTORY file = 00000001
number of time records written in RESTART file = 00000001
number of time records written in STATION file = 00000001
Analytical header files used:
ROMS/Functionals/ana_btflux.h
ROMS/Functionals/ana_initial.h
ROMS/Functionals/ana_nudgcoef.h
ROMS/Functionals/ana_smflux.h
ROMS/Functionals/ana_stflux.h
ROMS/TOMS: DONE... Saturday - June 29, 2013 - 8:24:44 PM